Documentation for ms-ident (0.0.21)

Alphabetic Index

File Listing

README

Namespace Listing A-Z

A

AminoacidModification (Ms::Ident::Pepxml)

D

Db (Ms::Ident::Peptide)

E

EnzymaticSearchConstraint (Ms::Ident::Pepxml)

I

IO (Ms::Ident::Peptide::Db)
Ident (Ms)

M

MSMSRunSummary (Sequest::PepXML)
Merge
Ms
MsmsPipelineAnalysis (Ms::Ident::Pepxml)
MsmsRunSummary (Ms::Ident::Pepxml)

N

Numeric

P

Parameters (Ms::Ident::Pepxml)
Parser (Proph::ProtSummary)
Pep (Proph::Prot)
Pep (Proph::PepSummary)
Pep (SpecID)
PepSummary (Proph)
PepXML (Sequest)
Peptide (Ms::Ident)
PeptideHit (Ms::Ident)
Pepxml (Ms::Ident)
Proph
Prot (SpecID)
Prot (Proph)
Prot (Proph::PepSummary)
ProtGroup (Proph)
ProtSummary (Proph)
Protein (Ms::Ident)
ProteinGroup (Ms::Ident)
ProteinHit (Ms::Ident)

Q

Qvalue (Ms::Ident::PeptideHit)

S

SampleEnzyme (Ms::Ident::Pepxml)
Search (Ms::Ident)
SearchDatabase (Ms::Ident::Pepxml)
SearchGroup (Ms::Ident)
SearchHit (Sequest::PepXML)
SearchHit (Ms::Ident::Pepxml)
SearchResult (Ms::Ident::Pepxml)
SearchSummary (Ms::Ident::Pepxml)
Sequest
SpecID
SpectrumQuery (Ms::Ident::Pepxml)

T

TerminalModification (Ms::Ident::Pepxml)