Class: Bio::TrEMBL

Inherits:

UniProtKB

• Object
• DB
• EMBLDB
• UniProtKB
• Bio::TrEMBL

Defined in:

lib/bio/db/embl/trembl.rb

Overview

Bio::TrEMBL is deprecated. Use Bio::UniProtKB.

Constant Summary

Constants included from EMBLDB::Common

EMBLDB::Common::DELIMITER, EMBLDB::Common::RS, EMBLDB::Common::TAGSIZE

Instance Method Summary

• #initialize(str) ⇒ TrEMBL constructor

  Bio::TrEMBL is deprecated.

Methods inherited from UniProtKB

#cc, #dr, #dt, #embl_dr, #entry_id, #ft, #gene_name, #gene_names, #gn, #hi, #id_line, #molecule, #oh, #os, #ox, #protein_name, #ref, #references, #seq, #sequence_length, #set_RN, #sq, #synonyms

Methods included from EMBLDB::Common

#ac, #accession, #de, #dr, #kw, #oc, #og, #os, #ref, #references

Methods inherited from DB

#entry_id, #exists?, #fetch, #get, open, #tags

Constructor Details

#initialize(str) ⇒ TrEMBL

Bio::TrEMBL is deprecated. Use Bio::UniProtKB.

# File 'lib/bio/db/embl/trembl.rb', line 18

def initialize(str)
  warn "Bio::TrEMBL is deprecated. Use Bio::UniProtKB."
  super(str)
end