Module: Bio::GFFbrowser

Defined in:

lib/bio/db/gff/gff3.rb,
lib/bio/db/gff/gff3fasta.rb,
lib/bio/db/gff/gffrecord.rb,
lib/bio/output/gfflogger.rb,
lib/bio/db/gff/gffsection.rb,
lib/bio/db/gff/gffsequence.rb,
lib/bio/db/gff/gffvalidate.rb,
lib/bio/db/gff/gff3parserec.rb,
lib/bio/db/gff/gffcomponent.rb,
lib/bio/db/gff/gff3parsefile.rb,
lib/bio/output/gfffastawriter.rb,
lib/bio/db/gff/digest/gffparser.rb,
lib/bio/db/gff/digest/gffnocache.rb,
lib/bio/db/gff/digest/gffinmemory.rb,
lib/bio/db/gff/digest/gfflrucache.rb,
lib/bio/db/gff/block/gffblockparser.rb

Defined Under Namespace

Modules: Block, Digest, FastLineParser, Helpers Classes: FastLineRecord, FastaRecord, FastaWriter, GFF3, GFF3ParseFile, Record

Constant Summary

GFF3_SEQID =

0

GFF3_SOURCE =

1

GFF3_TYPE =

2

GFF3_START =

3

GFF3_END =

4

GFF3_SCORE =

5

GFF3_STRAND =

6

GFF3_PHASE =

7

GFF3_ATTRIBUTES =

8